SNUB (Systems Neuro Browser)
SNUB is a visual interface for systems neuroscience. Using a set of linked data-views, users can explore relationships between raw video, 3D animal pose, behavior annotations, neural activity, or any other relevant time-series data.
Loading data is simple with the snub.io module. For example the following code creates a new project with paired electrophysiology and video data.
import snub.io
project_directory = 'path/to/new/project'
snub.io.create_project(project_directory, duration=1800)
snub.io.add_video(project_directory, 'path/to/my_video.avi', name='IR_camera')
snub.io.add_spikeplot(project_directory, 'my_ephys_data', spike_times, spike_labels)
We also support automatic conversion of NWB files to SNUB projects for a limited set of NWB neurodata types.